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  • Top cofit genes for GFF4999 from Variovorax sp. SCN45

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6430 L-carnitine dehydratase/bile acid-inducible protein F no 0.56
    2 GFF6802 Uncharacterized MFS-type transporter no 0.53
    3 GFF6223 T6SS outer membrane component TssL (ImpK/VasF) / OmpA/MotB domain no 0.52
    4 GFF3181 FIG005069: Hypothetical protein no 0.50
    5 GFF2698 Transcriptional regulator, LysR family no 0.49
    6 GFF2231 3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6) no 0.49
    7 GFF3438 Amidohydrolase family protein no 0.49
    8 GFF5935 VgrG protein no 0.48
    9 GFF3353 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) no 0.47
    10 GFF3733 no description no 0.46
    11 GFF2502 O-antigen acetylase 0.30 0.46
    12 GFF5118 gluconolactonase family protein no 0.45
    13 GFF571 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) no 0.44
    14 GFF1136 hypothetical protein no 0.44
    15 GFF2182 Inner membrane component of TAM transport system no 0.44
    16 GFF4299 3-ketoacyl-CoA thiolase no 0.44
    17 GFF3959 Uncharacterized integral membrane endopeptidase Bmul_2226 no 0.44
    18 GFF574 Tol-Pal system-associated acyl-CoA thioesterase no 0.43
    19 GFF4108 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.42
    20 GFF4125 DNA-binding transcriptional regulator, MocR family / aminotransferase domain 0.43 0.42

    Or look for negative cofitness