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  • Top cofit genes for GFF4992 from Variovorax sp. SCN45

    Transcriptional regulator, AcrR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2382 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.66) no 0.56
    2 GFF4845 Conjugative transfer protein TrbJ no 0.55
    3 GFF7129 Mobile element protein no 0.55
    4 GFF4173 5-methyltetrahydropteroyltriglutamate--homocystei ne methyltransferase (EC 2.1.1.14) no 0.55
    5 GFF6581 Coupling protein VirD4, ATPase required for T-DNA transfer no 0.54
    6 GFF4593 Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) no 0.51
    7 GFF2269 Uncharacterized MFS-type transporter 0.33 0.51
    8 GFF2911 Predicted D-glucarate or D-galactorate regulator, GntR family no 0.51
    9 GFF254 N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17), type 2 0.46 0.51
    10 GFF3750 no description no 0.50
    11 GFF2101 no description no 0.49
    12 GFF2849 hypothetical protein no 0.48
    13 GFF3723 Cytochrome c5 no 0.48
    14 GFF189 Negative transcriptional regulator no 0.48
    15 GFF3404 Benzoyl-CoA-dihydrodiol lyase (EC 4.1.2.44) no 0.48
    16 GFF4670 Transcriptional regulator, AcrR family no 0.48
    17 GFF2952 Arsenic resistance protein ArsH no 0.47
    18 GFF1792 Transcriptional regulator, IclR family no 0.47
    19 GFF1729 HIPA PROTEIN no 0.47
    20 GFF1611 no description no 0.47

    Or look for negative cofitness