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Cofit
Protein
Homologs
Top cofit genes for GFF4990 from
Variovorax sp. SCN45
Acyl-CoA hydrolase (EC 3.1.2.20)
SEED: Acyl-CoA hydrolase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF315
FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase
no
0.56
2
GFF5921
T6SS protein serine/threonine phosphatase PppA
no
0.56
3
GFF3745
Uncharacterized UPF0721 integral membrane protein
no
0.55
4
GFF6516
Cytochrome c oxidase polypeptide II (EC 1.9.3.1)
no
0.52
5
GFF6588
Glyoxylate carboligase (EC 4.1.1.47)
no
0.52
6
GFF6359
FIG01219766: hypothetical protein
no
0.51
7
GFF176
ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines)
no
0.50
8
GFF4897
Probable ALANIN-rich signal peptide protein
no
0.49
9
GFF5928
hypothetical protein
no
0.49
10
GFF747
Protocatechuate 4,5-dioxygenase beta chain (EC 1.13.11.8)
no
0.49
11
GFF2722
Transcriptional regulator, LysR family
no
0.47
12
GFF2016
hypothetical protein
no
0.46
13
GFF4352
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
no
0.46
14
GFF2038
ABC transporter, substrate-binding protein (cluster 7, di-/tri-carboxylate)
no
0.46
15
GFF2888
ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate)
no
0.46
16
GFF6883
D-amino acid dehydrogenase (EC 1.4.99.6)
no
0.46
17
GFF5161
Glutathione S-transferase (EC 2.5.1.18)
0.57
0.45
18
GFF7099
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC 5.3.3.10)
no
0.45
19
GFF6596
Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE
no
0.44
20
GFF6307
hypothetical protein
no
0.44
Or look for
negative cofitness