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  • Top cofit genes for GFF4988 from Variovorax sp. SCN45

    Gentisate 1,2-dioxygenase (EC 1.13.11.4)
    SEED: Gentisate 1,2-dioxygenase (EC 1.13.11.4)
    KEGG: gentisate 1,2-dioxygenase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF627 Secretion protein HlyD no 0.58
    2 GFF4063 Cytochrome c family protein no 0.55
    3 GFF5053 Uncharacterized protein SPO0681 no 0.51
    4 GFF427 no description no 0.51
    5 GFF3309 Beta-hexosaminidase (EC 3.2.1.52) no 0.49
    6 GFF2711 hypothetical protein no 0.48
    7 GFF1152 Lysine decarboxylase family no 0.47
    8 GFF3002 Cobalt-containing nitrile hydratase subunit beta (EC 4.2.1.84) no 0.46
    9 GFF6720 no description no 0.46
    10 GFF6653 Aminotransferase, class III no 0.46
    11 GFF1948 Phage integrase no 0.46
    12 GFF1873 KEGG: LacI family transcriptional regulator no 0.45
    13 GFF3259 Lysophospholipase (EC 3.1.1.5); Monoglyceride lipase (EC 3.1.1.23) no 0.44
    14 GFF5927 3-oxoacyl-[ACP] synthase no 0.44
    15 GFF6438 hypothetical protein no 0.44
    16 GFF869 Transcriptional regulator RutR of pyrimidine catabolism (TetR family) no 0.44
    17 GFF6579 Conjugative transfer protein TrbB no 0.44
    18 GFF6030 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) no 0.43
    19 GFF6900 Biofilm PGA synthesis N-glycosyltransferase PgaC (EC 2.4.-.-) no 0.43
    20 GFF110 pyridoxal-phosphate dependent enzyme family protein no 0.43

    Or look for negative cofitness