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  • Top cofit genes for GFF4975 from Sphingobium sp. HT1-2

    RNA polymerase ECF-type sigma factor
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF954 Regulatory protein LuxR no 0.83
    2 GFF4905 hypothetical protein no 0.78
    3 GFF3716 hypothetical protein no 0.75
    4 GFF4190 [Protein-PII] uridylyltransferase (EC 2.7.7.59) / [Protein-PII]-UMP uridylyl-removing enzyme no 0.74
    5 GFF3372 hypothetical protein no 0.69
    6 GFF1249 Capsular polysaccharide biosynthesis protein no 0.68
    7 GFF4661 Arsenate reductase (EC 1.20.4.1) glutaredoxin-coupled, glutaredoxin-like family no 0.68
    8 GFF5187 NAD synthetase (EC 6.3.1.5) / Glutamine amidotransferase chain of NAD synthetase no 0.67
    9 GFF1764 Outer membrane protein A precursor no 0.67
    10 GFF4614 Transcriptional regulator, AcrR family no 0.67
    11 GFF4469 hypothetical protein no 0.66
    12 GFF783 protein of unknown function DUF924 no 0.64
    13 GFF5218 ATP synthase protein I no 0.64
    14 GFF966 hypothetical protein no 0.63
    15 GFF3413 hypothetical protein no 0.63
    16 GFF1145 RNA-binding protein Hfq / RNA-binding protein Hfq no 0.63
    17 GFF3320 Transcriptional regulator, AcrR family no 0.63
    18 GFF1079 Lactoylglutathione lyase (EC 4.4.1.5) no 0.62
    19 GFF2518 hypothetical protein no 0.62
    20 GFF4907 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.61

    Or look for negative cofitness