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  • Top cofit genes for GFF4973 from Variovorax sp. SCN45

    Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)
    SEED: Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)
    KEGG: branched-chain amino acid transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2981 no description no 0.62
    2 GFF1115 Putative transmembrane protein no 0.62
    3 GFF4459 Acyl-CoA:1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) no 0.57
    4 GFF588 putative membrane protein no 0.57
    5 GFF723 RNA polymerase ECF-type sigma factor no 0.56
    6 GFF2449 Beta-ureidopropionase (EC 3.5.1.6) no 0.55
    7 GFF1472 Tricarboxylate transport protein TctC no 0.53
    8 GFF6475 hypothetical protein no 0.53
    9 GFF3029 T6SS component TssM (IcmF/VasK) no 0.52
    10 GFF5750 Flagellar M-ring protein FliF no 0.52
    11 GFF1690 KEGG: DNA-binding protein H-NS no 0.52
    12 GFF5665 no description no 0.51
    13 GFF4522 Uncharacterized MFS-type transporter no 0.50
    14 GFF5189 L-arabinolactonase (EC 3.1.1.15) no 0.50
    15 GFF796 Transcriptional activator MetR no 0.49
    16 GFF5289 hypothetical protein no 0.49
    17 GFF7313 hypothetical protein no 0.49
    18 GFF4269 Uncharacterized SAM-dependent O-methyltransferase no 0.49
    19 GFF834 hypothetical protein no 0.48
    20 GFF4090 Glutamate/aspartate ABC transporter, permease protein GltK (TC 3.A.1.3.4) no 0.48

    Or look for negative cofitness