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  • Top cofit genes for GFF4969 from Hydrogenophaga sp. GW460-11-11-14-LB1

    PAS/PAC sensor signal transduction histidine kinase
    SEED: PAS/PAC sensor signal transduction histidine kinase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4273 Lysine decarboxylase family no 0.56
    2 GFF1313 Histidinol-phosphate aminotransferase (EC 2.6.1.9) no 0.53
    3 GFF1722 Short-chain dehydrogenase/reductase SDR no 0.53
    4 GFF4580 Selenoprotein O and cysteine-containing homologs no 0.52
    5 GFF1363 Transaldolase (EC 2.2.1.2) no 0.52
    6 GFF3195 Putative DNA methylase no 0.51
    7 GFF1364 Phosphogluconate repressor HexR, RpiR family no 0.51
    8 GFF904 Mobile element protein no 0.51
    9 GFF202 Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4) no 0.51
    10 GFF3268 Urease gamma subunit (EC 3.5.1.5) no 0.50
    11 GFF1957 Rhodanese-related sulfurtransferase no 0.49
    12 GFF2722 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC no 0.49
    13 GFF3537 CopG protein no 0.49
    14 GFF3129 Mobile element protein no 0.48
    15 GFF2485 Xaa-Pro aminopeptidase (EC 3.4.11.9) no 0.47
    16 GFF137 Glyoxylate carboligase (EC 4.1.1.47) no 0.46
    17 GFF370 AMP nucleosidase (EC 3.2.2.4) no 0.45
    18 GFF650 Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR no 0.44
    19 GFF2194 Ribulose bisphosphate carboxylase small chain (EC 4.1.1.39) no 0.44
    20 GFF5351 Predicted transcription regulator, contains HTH domain (MarR family) no 0.44

    Or look for negative cofitness