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  • Top cofit genes for GFF4962 from Variovorax sp. SCN45

    Multidrug resistance transporter, Bcr/CflA family
    SEED: Multidrug resistance transporter, Bcr/CflA family
    KEGG: MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5927 3-oxoacyl-[ACP] synthase no 0.56
    2 GFF2357 DNA repair protein RecN 0.42 0.54
    3 GFF4329 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.54
    4 GFF4041 Lipid A phosphoethanolamine transferase, putative no 0.53
    5 GFF719 no description no 0.53
    6 GFF4918 hypothetical protein no 0.52
    7 GFF5667 Transcriptional regulator, LysR family no 0.52
    8 GFF6010 MmgE/PrpD family protein no 0.52
    9 GFF2693 no description no 0.52
    10 GFF1071 no description no 0.51
    11 GFF1994 Glutamate carboxypeptidase (EC 3.4.17.11) no 0.51
    12 GFF6444 no description no 0.51
    13 GFF3617 Dienelactone hydrolase family protein no 0.50
    14 GFF2713 Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily no 0.50
    15 GFF5832 MoaF protein precursor no 0.49
    16 GFF5397 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.48
    17 GFF4583 TRAP-type C4-dicarboxylate transport system, large permease component no 0.48
    18 GFF7014 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) no 0.48
    19 GFF3943 Poly(A) polymerase (EC 2.7.7.19) no 0.47
    20 GFF1665 Nicotinamidase/isochorismatase family protein no 0.47

    Or look for negative cofitness