Top cofit genes for GFF496 from Variovorax sp. SCN45

Squalene synthase (EC 2.5.1.21)
SEED: Phytoene synthase (EC 2.5.1.32)

Rank Hit Name Description Conserved? Cofitness  
1 GFF990 LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22) no 0.67
2 GFF2343 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.65
3 GFF1973 NAD(P)H oxidoreductase YrkL @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 no 0.63
4 GFF6017 NADPH-dependent 7-cyano-7-deazaguanine reductase (EC 1.7.1.13) no 0.61
5 GFF341 ATP-dependent Clp protease ATP-binding subunit ClpA no 0.61
6 GFF4175 FMN reductase (NADH) (EC 1.5.1.42) no 0.60
7 GFF5383 DNA topoisomerase III, Burkholderia type (EC 5.99.1.2) no 0.60
8 GFF5384 Proteins containing SET domain no 0.60
9 GFF2576 6-carboxy-5,6,7,8-tetrahydropterin synthase (EC 4.1.2.50) no 0.59
10 GFF5483 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits 0.37 0.59
11 GFF1861 Transcriptional regulator, IclR family no 0.58
12 GFF2455 Transcriptional regulator RutR of pyrimidine catabolism (TetR family) no 0.57
13 GFF212 Ribosome association toxin RatA 0.58 0.56
14 GFF237 ABC-type branched-chain amino acid transport systems, periplasmic component no 0.56
15 GFF232 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) no 0.55
16 GFF5889 Uracil-DNA glycosylase, family 1 (EC 3.2.2.27) no 0.54
17 GFF7306 FolM Alternative dihydrofolate reductase 1 no 0.54
18 GFF5214 7-cyano-7-deazaguanine synthase (EC 6.3.4.20) no 0.54
19 GFF3081 no description no 0.54
20 GFF5465 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Vanillate O-demethylase oxidoreductase (EC 1.14.13.-) no 0.54

Or look for negative cofitness