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  • Top cofit genes for GFF4959 from Sphingobium sp. HT1-2

    UPF0301 protein YqgE
    SEED: UPF0301 protein YqgE
    KEGG: putative transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5052 Pirin 0.53 0.95
    2 GFF1696 Excinuclease ABC subunit A 0.60 0.89
    3 GFF484 Predicted carboxypeptidase no 0.89
    4 GFF3505 ABC transporter, fused permease protein 0.40 0.88
    5 GFF1158 di-heme cytochrome c peroxidase no 0.88
    6 GFF1721 Xylan 1,4-beta-xylosidase (EC 3.2.1.37) no 0.88
    7 GFF3104 Error-prone repair homolog of DNA polymerase III alpha subunit (EC 2.7.7.7) no 0.87
    8 GFF3914 Chloride channel protein no 0.87
    9 GFF4546 hypothetical protein no 0.86
    10 GFF4915 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.67 0.86
    11 GFF2602 hypothetical protein no 0.86
    12 GFF3683 Probable low-affinity inorganic phosphate transporter no 0.86
    13 GFF4971 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58) no 0.85
    14 GFF3474 hypothetical protein 0.33 0.85
    15 GFF2824 alpha-L-fucosidase (EC 3.2.1.51) no 0.85
    16 GFF4086 TonB-dependent receptor no 0.84
    17 GFF1930 Gluconolactonase (EC 3.1.1.17) no 0.84
    18 GFF376 hypothetical protein no 0.84
    19 GFF4580 CzcABC family efflux RND transporter, membrane fusion protein no 0.84
    20 GFF5338 Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent (EC 1.1.2.8) 0.41 0.84

    Or look for negative cofitness