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  • Top cofit genes for PS417_25395 from Pseudomonas simiae WCS417

    excinuclease ABC subunit A
    SEED: Excinuclease ABC subunit A
    KEGG: excinuclease ABC subunit A

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_18685 excinuclease ABC subunit B 0.99 0.81
    2 PS417_24070 recombination and repair protein 0.92 0.66
    3 PS417_13500 ATP-dependent DNA helicase 0.58 0.63
    4 PS417_20800 recombination protein RecR 0.94 0.62
    5 PS417_00015 recombinase RecF 0.90 0.59
    6 PS417_10725 excinuclease ABC subunit C 0.99 0.56
    7 PS417_24305 DNA repair protein RadA 0.94 0.56
    8 PS417_15120 chromosome segregation protein SMC 0.41 0.55
    9 PS417_15115 exonuclease SbcD 0.57 0.50
    10 PS417_07635 transcription-repair coupling factor 0.96 0.49
    11 PS417_00405 DNA polymerase I 0.70 0.43
    12 PS417_06510 ATP-dependent DNA helicase DinG 0.84 0.43
    13 PS417_05815 recombinase RecA 0.88 0.41
    14 PS417_22895 tyrosine recombinase XerD 0.74 0.37
    15 PS417_13495 nuclease 0.64 0.36
    16 PS417_22830 DNA polymerase IV 0.89 0.35
    17 PS417_05820 recombinase RecX 0.70 0.34
    18 PS417_27870 ATP-dependent DNA helicase RecG 0.95 0.34
    19 PS417_27865 LysR family transcriptional regulator 0.84 0.31
    20 PS417_22855 ssDNA exonuclease RecJ 0.82 0.31

    Or look for negative cofitness