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  • Top cofit genes for GFF494 from Variovorax sp. SCN45

    RND efflux system, membrane fusion protein
    SEED: Probable Co/Zn/Cd efflux system membrane fusion protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6392 hypothetical protein no 0.71
    2 GFF4409 Aldehyde dehydrogenase (EC 1.2.1.3) no 0.63
    3 GFF5429 Iron(III) dicitrate transport protein FecA no 0.60
    4 GFF2354 FIG00555615: hypothetical protein 0.43 0.60
    5 GFF5408 Protein serine/threonine phosphatase PrpC, regulation of stationary phase no 0.59
    6 GFF5002 ABC-type branched-chain amino acid transport systems, periplasmic component no 0.59
    7 GFF7274 hypothetical protein no 0.59
    8 GFF1178 hypothetical protein no 0.59
    9 GFF2872 Cell division protein FtsL no 0.58
    10 GFF4655 SAM-dependent methyltransferase no 0.58
    11 GFF1119 Ribonuclease HI (EC 3.1.26.4) no 0.58
    12 GFF7004 Flagellar biosynthesis protein FlhA no 0.58
    13 GFF4407 Alkan-1-ol dehydrogenase, PQQ-dependent (EC 1.1.99.20) no 0.57
    14 GFF6532 Phosphoglucomutase (EC 5.4.2.2) @ Phosphomannomutase (EC 5.4.2.8) no 0.57
    15 GFF5347 hypothetical protein no 0.57
    16 GFF5526 Lysophospholipid transporter LplT / 2-acylglycerophosphoethanolamine acyltransferase (EC 2.3.1.40) 0.46 0.56
    17 GFF2835 putative TonB-dependent receptor no 0.56
    18 GFF4886 hypothetical protein no 0.56
    19 GFF2505 hypothetical protein no 0.56
    20 GFF531 hypothetical protein no 0.55

    Or look for negative cofitness