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  • Top cofit genes for GFF4933 from Variovorax sp. SCN45

    Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)
    SEED: Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)
    KEGG: peptide/nickel transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7322 hypothetical protein no 0.58
    2 GFF4619 Altronate dehydratase (EC 4.2.1.7) no 0.56
    3 GFF6608 hypothetical protein no 0.53
    4 GFF1493 BUG/TctC family periplasmic protein no 0.53
    5 GFF3300 hypothetical protein no 0.53
    6 GFF3819 hypothetical protein no 0.52
    7 GFF2195 FIG00732904: hypothetical protein no 0.51
    8 GFF2683 Protein containing domains DUF404, DUF407 no 0.51
    9 GFF1667 N-methylhydantoinase B (EC 3.5.2.14) no 0.51
    10 GFF6278 Ferredoxin-dependent glutamate synthase (EC 1.4.7.1) no 0.50
    11 GFF6758 Lactoylglutathione lyase (EC 4.4.1.5) no 0.50
    12 GFF5235 General secretion pathway protein D / Type II secretion outermembrane pore forming protein (PulD) 0.34 0.50
    13 GFF5107 Transcriptional regulator, LysR family no 0.50
    14 GFF6681 TonB-dependent siderophore receptor no 0.50
    15 GFF7097 Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) no 0.50
    16 GFF4069 DNA-binding heavy metal response regulator 0.20 0.49
    17 GFF2679 Glycerol kinase (EC 2.7.1.30) 0.56 0.49
    18 GFF335 Cytosine deaminase (EC 3.5.4.1) no 0.49
    19 GFF5858 heme uptake regulator no 0.49
    20 GFF770 Limit dextrin alpha-1,6-maltotetraose-hydrolase (EC 3.2.1.196) no 0.48

    Or look for negative cofitness