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    • Top cofit genes for GFF4930 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4804 tRNA threonylcarbamoyladenosine biosynthesis protein TsaE no 0.58
    2 GFF1180 hypothetical protein no 0.57
    3 GFF7334 Nucleoside-diphosphate-sugar epimerases no 0.57
    4 GFF6097 1,2-phenylacetyl-CoA epoxidase, subunit E (EC 1.14.13.149) no 0.49
    5 GFF6687 hypothetical protein no 0.48
    6 GFF5747 Flagellum-specific ATP synthase FliI no 0.47
    7 GFF1598 no description no 0.47
    8 GFF7369 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) no 0.47
    9 GFF882 Outer membrane porin no 0.47
    10 GFF1759 PQQ-dependent oxidoreductase, gdhB family no 0.46
    11 GFF6105 Aspartate racemase (EC 5.1.1.13) no 0.46
    12 GFF3921 Tryptophan 2,3-dioxygenase (EC 1.13.11.11) no 0.45
    13 GFF1181 hypothetical protein no 0.45
    14 GFF1117 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) no 0.45
    15 GFF3662 hypothetical protein no 0.44
    16 GFF1321 Probable diguanylate cyclase YeaP no 0.44
    17 GFF1458 no description no 0.44
    18 GFF3101 RidA/YER057c/UK114 superfamily, group 2, YoaB-like protein no 0.44
    19 GFF3932 Acetyltransferase, GNAT family no 0.44
    20 GFF1184 UPF0060 membrane protein YnfA no 0.43

    Or look for negative cofitness