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  • Top cofit genes for GFF4925 from Variovorax sp. SCN45

    ATPase component BioM of energizing module of biotin ECF transporter
    SEED: ATPase component BioM of energizing module of biotin ECF transporter
    KEGG: cobalt/nickel transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1602 Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) no 0.72
    2 GFF675 KEGG: 2'-5' RNA ligase no 0.65
    3 GFF2680 Protein of unknown function DUF1058 no 0.65
    4 GFF2559 hypothetical protein no 0.62
    5 GFF1948 Phage integrase no 0.61
    6 GFF6455 Bll3817 protein no 0.60
    7 GFF5281 Xylulose kinase (EC 2.7.1.17) no 0.59
    8 GFF539 no description no 0.59
    9 GFF6366 T6SS component TssG (ImpH/VasB) no 0.59
    10 GFF1822 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) no 0.56
    11 GFF5735 Flagellar hook-associated protein FlgK no 0.56
    12 GFF110 pyridoxal-phosphate dependent enzyme family protein no 0.56
    13 GFF1090 Phosphohistidine phosphatase SixA no 0.55
    14 GFF3416 Alkanesulfonates transport system permease protein no 0.55
    15 GFF6355 T6SS secretion lipoprotein TssJ (VasD) no 0.55
    16 GFF2236 hypothetical protein no 0.55
    17 GFF4945 probable GntR-family transcriptional regulator no 0.54
    18 GFF3739 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) no 0.54
    19 GFF1745 Acyl-CoA dehydrogenase no 0.54
    20 GFF2261 Adenylate cyclase (EC 4.6.1.1) no 0.54

    Or look for negative cofitness