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Gene
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Cofit
Protein
Homologs
Top cofit genes for GFF4924 from
Hydrogenophaga sp. GW460-11-11-14-LB1
PhbF
SEED: PhbF
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF2498
Response regulator receiver:Transcriptional regulatory protein, C- terminal
0.64
0.72
2
GFF4107
Acetyl-coenzyme A synthetase (EC 6.2.1.1)
0.79
0.70
3
GFF5398
Nitrogen regulation protein NR(I)
no
0.68
4
GFF4779
Intracellular PHB depolymerase (EC 3.1.1.-)
0.51
0.62
5
GFF4563
[Protein-PII] uridylyltransferase (EC 2.7.7.59)
0.89
0.62
6
GFF3068
RNA polymerase sigma-54 factor RpoN
0.49
0.60
7
GFF5420
FIG00443700: hypothetical protein
no
0.60
8
GFF5395
Aldehyde dehydrogenase (EC 1.2.1.3)
0.46
0.59
9
GFF5529
Deacetylases, including yeast histone deacetylase and acetoin utilization protein
0.26
0.56
10
GFF3531
ABC transporter
no
0.56
11
GFF2497
Sensor protein basS/pmrB (EC 2.7.3.-)
no
0.55
12
GFF5418
ABC transporter permease protein
no
0.54
13
GFF1834
FIG00933367: hypothetical protein
no
0.54
14
GFF5415
Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent (EC 1.1.99.8)
no
0.53
15
GFF4335
ABC transporter, periplasmic substrate-binding protein
no
0.52
16
GFF3840
RND efflux system, inner membrane transporter CmeB
no
0.52
17
GFF4289
Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4)
0.82
0.51
18
GFF3922
Acetate permease ActP (cation/acetate symporter)
0.43
0.51
19
GFF3829
granule-associated protein
0.76
0.50
20
GFF4880
Propionate--CoA ligase (EC 6.2.1.17)
no
0.50
Or look for
negative cofitness