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  • Top cofit genes for PS417_25210 from Pseudomonas simiae WCS417

    TonB-dependent receptor
    SEED: Outer membrane vitamin B12 receptor BtuB
    KEGG: iron complex outermembrane recepter protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_08760 metalloprotease no 0.25
    2 PS417_20400 hypothetical protein no 0.22
    3 PS417_06790 arabinose transporter permease no 0.22
    4 PS417_07910 hypothetical protein no 0.22
    5 PS417_20435 membrane protein no 0.21
    6 PS417_20180 agmatinase 0.57 0.19
    7 PS417_20425 hypothetical protein no 0.19
    8 PS417_25185 hypothetical protein 0.32 0.18
    9 PS417_27415 fimbrial chaperone protein no 0.18
    10 PS417_03460 type III secretion protein HrpI no 0.17
    11 PS417_13885 chemotaxis protein CheY 0.13 0.17
    12 PS417_08030 transcriptional regulator 0.30 0.17
    13 PS417_03975 FruA 0.37 0.17
    14 PS417_08610 deoxyguanosinetriphosphate triphosphohydrolase 0.64 0.17
    15 PS417_15280 type VI secretion protein 0.46 0.17
    16 PS417_02430 histidine kinase no 0.17
    17 PS417_19125 LysR family transcriptional regulator no 0.17
    18 PS417_07790 hypothetical protein no 0.17
    19 PS417_16495 leucyl/phenylalanyl-tRNA--protein transferase no 0.17
    20 PS417_21405 hydrolase TatD 0.55 0.17

    Or look for negative cofitness