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  • Top cofit genes for GFF4916 from Variovorax sp. SCN45

    FIG00959407: hypothetical protein
    SEED: FIG00959407: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7356 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) no 0.61
    2 GFF215 RNA polymerase sigma-54 factor RpoN no 0.60
    3 GFF7242 hypothetical protein no 0.57
    4 GFF461 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.55
    5 GFF6226 ABC transporter, substrate-binding protein (cluster 12, methionine/phosphonates) no 0.53
    6 GFF1831 TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 3 no 0.53
    7 GFF3562 UDP-glucose 6-dehydrogenase (EC 1.1.1.22) no 0.52
    8 GFF274 Probable RNA methyltransferase PA1839 no 0.50
    9 GFF6556 hypothetical protein no 0.49
    10 GFF6123 ABC-type antimicrobial peptide transport system, ATPase component no 0.48
    11 GFF2637 no description no 0.48
    12 GFF3449 Intradiol ring-cleavage dioxygenase:Catechol dioxygenase, N-terminal no 0.48
    13 GFF1727 no description no 0.47
    14 GFF2851 Phosphoglycerate mutase family protein no 0.46
    15 GFF4299 3-ketoacyl-CoA thiolase no 0.46
    16 GFF1869 no description no 0.46
    17 GFF5466 NAD(P)H oxidoreductase YrkL @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 no 0.46
    18 GFF5690 Glutamate/aspartate ABC transporter, ATP-binding protein GltL (TC 3.A.1.3.4) no 0.45
    19 GFF6680 Aspartate ammonia-lyase (EC 4.3.1.1) no 0.45
    20 GFF4185 RNA polymerase ECF-type sigma factor no 0.45

    Or look for negative cofitness