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  • Top cofit genes for GFF491 from Variovorax sp. SCN45

    no description

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6032 Branched-chain amino acid ABC transporter, permease protein LivM (TC 3.A.1.4.1) no 0.76
    2 GFF1788 hypothetical protein no 0.73
    3 GFF3546 Chaperone protein HtpG no 0.73
    4 GFF4488 Metal-binding GTPase YjiA no 0.72
    5 GFF6033 Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1) no 0.71
    6 GFF2740 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) no 0.71
    7 GFF1900 Transcriptional regulator, LysR family no 0.70
    8 GFF349 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) no 0.70
    9 GFF4611 Predicted transcriptional regulator for fatty acid degradation FadP, TetR family no 0.69
    10 GFF3091 Septum-associated cell division protein DedD no 0.68
    11 GFF4851 Coupling protein VirD4, ATPase required for T-DNA transfer no 0.68
    12 GFF156 Glycosyl transferase, group 2 family no 0.68
    13 GFF5678 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) no 0.67
    14 GFF5673 Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-) no 0.67
    15 GFF5274 Various polyols ABC transporter, permease protein 2 no 0.66
    16 GFF6198 D-malate dehydrogenase [decarboxylating] (EC 1.1.1.83) no 0.65
    17 GFF483 Fumarate hydratase class I, aerobic (EC 4.2.1.2) no 0.65
    18 GFF982 Cell division protein ZapE no 0.65
    19 GFF6190 3-hydroxyisobutyrate dehydrogenase family protein no 0.65
    20 GFF4580 hypothetical protein no 0.65

    Or look for negative cofitness