Top cofit genes for GFF4909 from Variovorax sp. SCN45

Two-component transcriptional response regulator, OmpR family
SEED: DNA-binding response regulator

Rank	Hit	Name	Description	Conserved?	Cofitness
1	GFF3582		Tripartite tricarboxylate transporter TctC family	no	0.65
2	GFF255		2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117)	no	0.65
3	GFF4955		hypothetical protein	no	0.64
4	GFF6042		Fatty acid desaturase (EC 1.14.19.1); Delta-9 fatty acid desaturase (EC 1.14.19.1)	0.47	0.64
5	GFF5307		Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.241)	no	0.64
6	GFF7295		HPr kinase/phosphorylase	no	0.64
7	GFF239		DNA polymerase III chi subunit (EC 2.7.7.7)	no	0.63
8	GFF6036		DNA translocase FtsK	no	0.63
9	GFF4397		hypothetical protein	no	0.61
10	GFF5840		hypothetical protein	no	0.61
11	GFF6294		Cell division protein	no	0.60
12	GFF5241		General secretion pathway protein J	no	0.60
13	GFF6855		hypothetical protein	no	0.59
14	GFF7325		Glucans biosynthesis glucosyltransferase H	no	0.59
15	GFF7371		Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5)	0.35	0.58
16	GFF4242		TRAP-type C4-dicarboxylate transport system, periplasmic component	no	0.58
17	GFF3765		no description	0.46	0.58
18	GFF6424		Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)	0.54	0.58
19	GFF3753		Hydroxymethylpyrimidine ABC transporter, substrate-binding component	no	0.57
20	GFF994		Cytoskeleton protein RodZ	no	0.57

Or look for negative cofitness