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  • Top cofit genes for GFF4906 from Variovorax sp. SCN45

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5521 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.128) no 0.57
    2 GFF6698 ClpXP protease specificity-enhancing factor SspB no 0.56
    3 GFF153 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.54
    4 GFF3616 2-hydroxychromene-2-carboxylate isomerase family protein no 0.53
    5 GFF240 Cytosol aminopeptidase PepA (EC 3.4.11.1) no 0.53
    6 GFF1064 Transcriptional regulator, GntR family no 0.52
    7 GFF4000 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) no 0.52
    8 GFF5528 Conjugative transfer protein TrbL no 0.52
    9 GFF5780 Positive regulator of L-idonate catabolism no 0.52
    10 GFF3990 hypothetical protein no 0.52
    11 GFF5303 Tricarboxylate transport transcriptional regulator TctD no 0.49
    12 GFF1617 Phosphonate uptake and metabolism regulator, LysR-family no 0.48
    13 GFF1360 3-demethylubiquinol 3-O-methyltransferase (EC 2.1.1.64) @ 2-polyprenyl-6-hydroxyphenyl methylase (EC 2.1.1.222) no 0.48
    14 GFF3258 hypothetical protein no 0.48
    15 GFF5080 DNA recombination-dependent growth factor RdgC no 0.48
    16 GFF5035 Opine oxidase subunit A no 0.48
    17 GFF6566 hypothetical protein no 0.47
    18 GFF6711 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.47
    19 GFF7259 no description no 0.47
    20 GFF2103 Regulatory protein, LuxR:Tetratricopeptide TPR_4 no 0.47

    Or look for negative cofitness