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  • Top cofit genes for PS417_25120 from Pseudomonas simiae WCS417

    capsular biosynthesis protein
    SEED: Capsular polysaccharide synthesis enzyme CpsC, polysaccharide export
    KEGG: polysaccharide export outer membrane protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_25100 hypothetical protein 0.29 0.73
    2 PS417_08225 acetolactate synthase no 0.62
    3 PS417_08195 hypothetical protein no 0.62
    4 PS417_08205 acetyltransferase no 0.61
    5 PS417_20650 hypothetical protein no 0.59
    6 PS417_08180 glycosyl transferase 0.28 0.56
    7 PS417_08200 hypothetical protein no 0.55
    8 PS417_08230 lipopolysaccharide biosynthesis protein RfbH no 0.54
    9 PS417_08245 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase no 0.54
    10 PS417_08165 UDP-glucose 4-epimerase no 0.53
    11 PS417_08190 membrane protein 0.58 0.53
    12 PS417_08185 glycosyl transferase no 0.52
    13 PS417_13395 phosphoglucomutase no 0.52
    14 PS417_25105 hypothetical protein no 0.49
    15 PS417_20655 group 1 glycosyl transferase no 0.48
    16 PS417_20660 hypothetical protein no 0.48
    17 PS417_20645 membrane protein no 0.46
    18 PS417_20665 hypothetical protein no 0.46
    19 PS417_20670 glycosyl transferase family 2 no 0.45
    20 PS417_20635 ABC transporter ATP-binding protein no 0.44

    Or look for negative cofitness