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Gene
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Cofit
Protein
Homologs
Top cofit genes for GFF490 from
Sphingobium sp. HT1-2
UPF0145 protein YbjQ
SEED: PlcB, ORFX, ORFP, ORFB, ORFA, ldh gene
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF4587
hypothetical protein
no
0.84
2
GFF1784
hypothetical protein
no
0.81
3
GFF3505
ABC transporter, fused permease protein
no
0.80
4
GFF2178
hypothetical protein
no
0.80
5
GFF1280
Bll3966 protein
0.35
0.79
6
GFF4573
Transaldolase (EC 2.2.1.2)
0.65
0.79
7
GFF1211
Imidazolonepropionase (EC 3.5.2.7)
no
0.77
8
GFF2607
hypothetical protein
no
0.77
9
GFF4408
Mobile element protein
no
0.76
10
GFF5177
Two-component transcriptional response regulator, OmpR family
no
0.75
11
GFF431
hypothetical protein
no
0.75
12
GFF988
hypothetical protein
no
0.75
13
GFF1264
hypothetical protein
no
0.75
14
GFF5103
Enoyl-CoA hydratase (EC 4.2.1.17)
no
0.75
15
GFF467
NAD(FAD)-utilizing dehydrogenase, sll0175 homolog
0.32
0.74
16
GFF4425
LysR-family transcriptional regulator similar to hydrogen peroxide-inducible genes activator
no
0.74
17
GFF4832
hypothetical protein
no
0.73
18
GFF3679
hypothetical protein
no
0.73
19
GFF891
hypothetical protein
no
0.73
20
GFF5052
Pirin
0.30
0.73
Or look for
negative cofitness