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  • Top cofit genes for GFF4896 from Variovorax sp. SCN45

    Integrase
    SEED: Integrase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3730 Integral membrane protein no 0.66
    2 GFF6515 no description no 0.62
    3 GFF7322 hypothetical protein no 0.59
    4 GFF4406 Alkane-1 monooxygenase (EC 1.14.15.3) no 0.58
    5 GFF3036 no description no 0.58
    6 GFF6304 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) no 0.57
    7 GFF5018 Uncharacterized protein YpeB no 0.56
    8 GFF7325 Glucans biosynthesis glucosyltransferase H no 0.56
    9 GFF1331 Transcriptional regulator, AraC family no 0.56
    10 GFF4767 Efflux ABC transporter, permease/ATP-binding protein no 0.56
    11 GFF3121 hypothetical protein no 0.55
    12 GFF6812 no description no 0.55
    13 GFF4882 putative plasmid stabilization protein no 0.55
    14 GFF6424 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) no 0.54
    15 GFF5779 L-idonate 5-dehydrogenase (EC 1.1.1.264) no 0.53
    16 GFF6889 Alpha-aminoadipate aminotransferase (EC 2.6.1.39) @ Leucine transaminase (EC 2.6.1.6) @ Valine transaminase no 0.53
    17 GFF5291 Ferrichrome-iron receptor no 0.53
    18 GFF4426 Homolog of eukaryotic DNA ligase III no 0.52
    19 GFF3399 Benzoate--CoA ligase (EC 6.2.1.25) no 0.52
    20 GFF6139 Serine/threonine kinase no 0.52

    Or look for negative cofitness