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  • Top cofit genes for PS417_25060 from Pseudomonas simiae WCS417

    O-antigen polymerase
    SEED: RbmD, similar to Lipid A core - O-antigen ligase and related enzymes

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_24950 hypothetical protein no 0.34
    2 PS417_23785 sulfite oxidase no 0.31
    3 PS417_25375 hypothetical protein no 0.31
    4 PS417_11935 ABC transporter substrate-binding protein no 0.30
    5 PS417_25160 hypothetical protein no 0.29
    6 PS417_26080 TonB-dependent receptor no 0.27
    7 PS417_17820 hypothetical protein no 0.26
    8 PS417_27995 type IV secretion protein Rhs no 0.26
    9 PS417_25090 hypothetical protein no 0.25
    10 PS417_06075 hypothetical protein no 0.25
    11 PS417_28535 TonB-dependent receptor no 0.25
    12 PS417_07900 hypothetical protein no 0.24
    13 PS417_09850 hypothetical protein no 0.24
    14 PS417_23740 LysR family transcriptional regulator no 0.23
    15 PS417_27605 hypothetical protein no 0.23
    16 PS417_24925 hypothetical protein no 0.22
    17 PS417_25010 fimbrial assembly protein no 0.22
    18 PS417_24915 hypothetical protein no 0.22
    19 PS417_07915 relaxase no 0.22
    20 PS417_00145 LysR family transcriptional regulator no 0.22

    Or look for negative cofitness