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  • Top cofit genes for GFF4888 from Variovorax sp. SCN45

    Mlr6156 protein
    SEED: Mlr6156 protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1749 Cystathionine beta-lyase (EC 4.4.1.8) no 0.63
    2 GFF6494 protein of unknown function DUF1232 no 0.59
    3 GFF265 RND efflux system, membrane fusion protein no 0.58
    4 GFF6399 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13), N-terminal domain no 0.58
    5 GFF5080 DNA recombination-dependent growth factor RdgC no 0.56
    6 GFF2380 Protein phosphatase 2C-like no 0.56
    7 GFF5288 Uncharacterized protein PA4513 no 0.56
    8 GFF256 Twitching motility protein PilT no 0.55
    9 GFF3090 Colicin V production protein no 0.54
    10 GFF1336 ABC transporter, substrate-binding protein RSc1750 no 0.54
    11 GFF2537 Glycerol-3-phosphate ABC transporter, substrate-binding protein UgpB no 0.53
    12 GFF7127 Mobile element protein no 0.53
    13 GFF5314 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ no 0.52
    14 GFF6324 Kup system potassium uptake protein no 0.52
    15 GFF4196 no description no 0.51
    16 GFF3175 Uncharacterized MFS-type transporter no 0.51
    17 GFF5628 Transcriptional regulator Daci_1847, LysR family no 0.51
    18 GFF5262 Ferric iron ABC transporter, iron-binding protein no 0.51
    19 GFF799 Rrf2 family transcriptional regulator, group III no 0.51
    20 GFF7014 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) no 0.51

    Or look for negative cofitness