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  • Top cofit genes for GFF4884 from Variovorax sp. SCN45

    UPF0380 proteins YafZ and homologs
    SEED: FIG00955278: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF541 Ser-tRNA(Ala) deacylase; Gly-tRNA(Ala) deacylase no 0.58
    2 GFF5937 T6SS component TssG (ImpH/VasB) no 0.55
    3 GFF2119 Type IV fimbrial biogenesis protein PilW no 0.55
    4 GFF1976 Transcriptional regulator, AcrR family no 0.54
    5 GFF6802 Uncharacterized MFS-type transporter no 0.54
    6 GFF7124 Mobile element protein no 0.53
    7 GFF5269 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) no 0.52
    8 GFF2266 FIG00441126: hypothetical protein no 0.51
    9 GFF7195 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) no 0.51
    10 GFF3535 Aquaporin Z no 0.49
    11 GFF6332 Maltodextrin glucosidase (EC 3.2.1.20) no 0.49
    12 GFF5480 no description no 0.48
    13 GFF2313 Two-component system sensor histidine kinase no 0.48
    14 GFF4705 Monooxygenase, flavin-binding family no 0.47
    15 GFF2244 hypothetical protein no 0.46
    16 GFF5270 BUG/TctC family periplasmic protein no 0.46
    17 GFF7101 hypothetical protein no 0.46
    18 GFF5583 Transcriptional regulator PA0181, LysR family no 0.45
    19 GFF2096 Acyl-CoA dehydrogenase family protein no 0.45
    20 GFF2551 Endonuclease/exonuclease/phosphatase no 0.45

    Or look for negative cofitness