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Cofit
Protein
Homologs
Top cofit genes for GFF4880 from
Variovorax sp. SCN45
y4eB gene in pNGR234a homolog
SEED: y4eB gene in pNGR234a homolog
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF247
ATP-dependent helicase HrpA
no
0.57
2
GFF6701
Regulatory protein, RpfE type
no
0.54
3
GFF1120
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
no
0.51
4
GFF5863
Ferrichrome-iron receptor
no
0.51
5
GFF536
no description
no
0.50
6
GFF5288
Uncharacterized protein PA4513
no
0.50
7
GFF4875
hypothetical protein
no
0.49
8
GFF6099
Ser/Thr protein phosphatase family protein
no
0.48
9
GFF7361
Acyl-coenzyme A thioesterase PaaD (Pse.pu.) (E. coli PaaI)
no
0.48
10
GFF5432
Glutathione S-transferase family protein
no
0.47
11
GFF6211
ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines)
no
0.47
12
GFF78
Cytochrome c family protein
no
0.47
13
GFF2286
BUG/TctC family periplasmic protein
no
0.47
14
GFF5851
TPR repeat
no
0.47
15
GFF478
Rrf2-linked NADH-flavin reductase
no
0.46
16
GFF6787
Copper tolerance protein
no
0.46
17
GFF5263
Ferric iron ABC transporter, permease protein
0.54
0.46
18
GFF6997
Flagellar basal-body rod protein FlgC
no
0.46
19
GFF3261
FIG003003: hypothetical protein
no
0.46
20
GFF6431
hypothetical protein
no
0.46
Or look for
negative cofitness