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  • Top cofit genes for GFF4880 from Variovorax sp. SCN45

    y4eB gene in pNGR234a homolog
    SEED: y4eB gene in pNGR234a homolog

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF247 ATP-dependent helicase HrpA no 0.57
    2 GFF6701 Regulatory protein, RpfE type no 0.54
    3 GFF1120 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.51
    4 GFF5863 Ferrichrome-iron receptor no 0.51
    5 GFF536 no description no 0.50
    6 GFF5288 Uncharacterized protein PA4513 no 0.50
    7 GFF4875 hypothetical protein no 0.49
    8 GFF6099 Ser/Thr protein phosphatase family protein no 0.48
    9 GFF7361 Acyl-coenzyme A thioesterase PaaD (Pse.pu.) (E. coli PaaI) no 0.48
    10 GFF5432 Glutathione S-transferase family protein no 0.47
    11 GFF6211 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) no 0.47
    12 GFF78 Cytochrome c family protein no 0.47
    13 GFF2286 BUG/TctC family periplasmic protein no 0.47
    14 GFF5851 TPR repeat no 0.47
    15 GFF478 Rrf2-linked NADH-flavin reductase no 0.46
    16 GFF6787 Copper tolerance protein no 0.46
    17 GFF5263 Ferric iron ABC transporter, permease protein 0.54 0.46
    18 GFF6997 Flagellar basal-body rod protein FlgC no 0.46
    19 GFF3261 FIG003003: hypothetical protein no 0.46
    20 GFF6431 hypothetical protein no 0.46

    Or look for negative cofitness