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  • Top cofit genes for GFF4879 from Sphingobium sp. HT1-2

    Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
    SEED: Acetoacetyl-CoA synthetase (EC 6.2.1.16) / Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5083 hypothetical protein 0.32 0.82
    2 GFF2884 FIG037995: Hypothetical protein no 0.79
    3 GFF2203 SWI/SNF family helicase no 0.79
    4 GFF1573 Enoyl-CoA hydratase (EC 4.2.1.17) => degradation of branched-chain amino acids and alpha-keto acids no 0.77
    5 GFF3690 Twin-arginine translocation pathway signal no 0.76
    6 GFF131 Methylmalonyl-CoA epimerase (EC 5.1.99.1) @ Ethylmalonyl-CoA epimerase no 0.75
    7 GFF2501 Two-component system sensor histidine kinase no 0.74
    8 GFF5065 Phenylalanine-4-hydroxylase (EC 1.14.16.1) no 0.74
    9 GFF4303 IncF plasmid conjugative transfer protein TrbC no 0.74
    10 GFF2796 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) no 0.73
    11 GFF5056 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) no 0.73
    12 GFF4855 DNA polymerase IV-like protein ImuB 0.30 0.73
    13 GFF4537 hypothetical protein no 0.73
    14 GFF4059 Transcriptional regulator, AcrR family no 0.73
    15 GFF5098 hypothetical protein no 0.73
    16 GFF4688 L-alanine-DL-glutamate epimerase (EC 5.1.1.n1) no 0.72
    17 GFF1165 hypothetical protein no 0.72
    18 GFF5037 Levanase (EC 3.2.1.65) no 0.72
    19 GFF493 hypothetical protein no 0.72
    20 GFF4260 Single-stranded DNA-binding protein no 0.71

    Or look for negative cofitness