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  • Top cofit genes for GFF4878 from Variovorax sp. SCN45

    putative lipoprotein
    SEED: Probable lipoprotein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4227 Thiamine pyrophosphate-requiring enzymes no 0.63
    2 GFF6033 Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1) no 0.61
    3 GFF1048 Acyl-CoA dehydrogenase; probable dibenzothiophene desulfurization enzyme no 0.61
    4 GFF3546 Chaperone protein HtpG no 0.60
    5 GFF3415 Cyclase no 0.59
    6 GFF2043 Efflux ABC transporter, permease protein no 0.58
    7 GFF1001 Ribosome LSU-associated GTP-binding protein HflX no 0.58
    8 GFF4580 hypothetical protein no 0.58
    9 GFF4908 NAD(P) transhydrogenase N-domain of subunit alpha (EC 1.6.1.2) no 0.58
    10 GFF3619 no description no 0.58
    11 GFF6784 D-amino acid dehydrogenase (EC 1.4.99.6) no 0.58
    12 GFF4635 Transketolase, N-terminal section (EC 2.2.1.1) no 0.58
    13 GFF4246 FIG00464377: hypothetical protein no 0.57
    14 GFF4469 Cell division protein FtsA no 0.57
    15 GFF4972 Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) no 0.57
    16 GFF665 hypothetical protein no 0.57
    17 GFF6324 Kup system potassium uptake protein no 0.56
    18 GFF1797 FIG022199: FAD-binding protein no 0.56
    19 GFF444 Cob(I)alamin adenosyltransferase (EC 2.5.1.17) @ Cob(I)alamin adenosyltransferase (EC 2.5.1.17), clustered with cobalamin synthesis no 0.56
    20 GFF4638 CDP-glucose 4,6-dehydratase (EC 4.2.1.45) no 0.56

    Or look for negative cofitness