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  • Top cofit genes for PS417_24885 from Pseudomonas simiae WCS417

    transcriptional regulator
    SEED: Transcriptional regulator, XRE family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_16370 chemotaxis protein CheY no 0.73
    2 PS417_10720 chemotaxis protein CheY no 0.71
    3 PS417_19560 amino acid ABC transporter substrate-binding protein no 0.69
    4 PS417_28265 pyridoxamine kinase no 0.68
    5 PS417_16160 ABC transporter substrate-binding protein no 0.59
    6 PS417_06365 RNA polymerase sigma factor no 0.56
    7 PS417_24595 histidine kinase 0.38 0.54
    8 PS417_12550 chemotaxis protein no 0.53
    9 PS417_13940 racemase 0.20 0.52
    10 PS417_03725 acyltransferase no 0.51
    11 PS417_06970 LysR family transcriptional regulator no 0.50
    12 PS417_08985 histidine kinase 0.45 0.48
    13 PS417_16070 TonB-dependent receptor no 0.46
    14 PS417_12920 endoribonuclease no 0.45
    15 PS417_09665 dimethylglycine dehydrogenase no 0.45
    16 PS417_23950 polynucleotide phosphorylase/polyadenylase no 0.45
    17 PS417_22710 TonB-dependent receptor no 0.44
    18 PS417_05975 chemotaxis protein CheW no 0.44
    19 PS417_07615 TetR family transcriptional regulator no 0.44
    20 PS417_13425 cupin 0.38 0.43

    Or look for negative cofitness