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  • Top cofit genes for GFF4858 from Variovorax sp. SCN45

    Transposase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3557 hypothetical protein no 0.63
    2 GFF3710 Lactoylglutathione lyase and related lyases no 0.62
    3 GFF4527 Transcriptional regulator, GntR family no 0.61
    4 GFF4313 2-dehydropantoate 2-reductase (EC 1.1.1.169) no 0.57
    5 GFF5107 Transcriptional regulator, LysR family no 0.56
    6 GFF6757 no description no 0.56
    7 GFF777 no description no 0.54
    8 GFF5502 Transcriptional regulator, LysR family no 0.54
    9 GFF6026 no description no 0.54
    10 GFF3489 Transcriptional regulator, AcrR family no 0.54
    11 GFF6640 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.52
    12 GFF623 Demethylmenaquinone methyltransferase-like protein no 0.52
    13 GFF5188 no description no 0.52
    14 GFF5996 BUG/TctC family periplasmic protein no 0.52
    15 GFF5266 Transaldolase (EC 2.2.1.2) no 0.51
    16 GFF1351 Acyl-CoA dehydrogenase no 0.51
    17 GFF6819 hypothetical protein no 0.51
    18 GFF6778 possible endonuclease/exonuclease/phosphatase family protein no 0.50
    19 GFF7340 ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.50
    20 GFF5645 ABC transporter, permease protein (cluster 12, methionine/phosphonates) / ABC transporter, permease protein (cluster 12, methionine/phosphonates) no 0.50

    Or look for negative cofitness