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  • Top cofit genes for GFF4856 from Variovorax sp. SCN45

    3-methylmercaptopropionyl-CoA dehydrogenase (DmdC)
    SEED: Acyl-CoA dehydrogenase (EC 1.3.8.7)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7248 no description no 0.55
    2 GFF1640 Polyketide synthase modules and related proteins no 0.54
    3 GFF6342 Mobile element protein no 0.54
    4 GFF6059 ABC transporter, permease protein 2 (cluster 1, maltose/g3p/polyamine/iron) no 0.51
    5 GFF5542 no description no 0.51
    6 GFF6799 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.50
    7 GFF4939 hypothetical protein no 0.50
    8 GFF1052 hypothetical protein no 0.49
    9 GFF1117 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) no 0.48
    10 GFF7093 5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase (EC 4.1.1.68) / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC 5.3.3.-) no 0.48
    11 GFF4420 Conjugative transfer protein TrbL no 0.48
    12 GFF6714 Putative cryptic D-serine deaminase (EC 4.3.1.18) no 0.47
    13 GFF2910 BUG/TctC family periplasmic protein no 0.47
    14 GFF1144 hypothetical protein no 0.47
    15 GFF7029 hypothetical protein no 0.46
    16 GFF5027 Aldehyde dehydrogenase B (EC 1.2.1.22) no 0.46
    17 GFF263 Secreted and surface protein containing fasciclin-like repeats no 0.46
    18 GFF2689 Protein containing transglutaminase-like domain, putative cysteine protease no 0.46
    19 GFF2118 hypothetical protein no 0.45
    20 GFF2691 no description no 0.45

    Or look for negative cofitness