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  • Top cofit genes for GFF485 from Hydrogenophaga sp. GW460-11-11-14-LB1

    putative protein PaaI, possibly involved in aromatic compounds catabolism
    SEED: putative protein PaaI, possibly involved in aromatic compounds catabolism

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3136 hypothetical protein no 0.50
    2 GFF2705 hypothetical protein no 0.46
    3 GFF4773 Protein-tyrosine kinase (EC 2.7.1.112) no 0.46
    4 GFF4139 Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation 0.15 0.46
    5 GFF5588 Protein rarD no 0.44
    6 GFF939 hypothetical protein no 0.43
    7 GFF1027 Ferredoxin, 2Fe-2S no 0.42
    8 GFF1613 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) no 0.42
    9 GFF449 hypothetical protein no 0.42
    10 GFF5689 Endonuclease/Exonuclease/phosphatase family protein no 0.42
    11 GFF3189 putative type II restriction endonuclease no 0.40
    12 GFF2529 hypothetical protein no 0.40
    13 GFF929 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.40
    14 GFF4015 hypothetical protein no 0.39
    15 GFF3158 hypothetical protein no 0.39
    16 GFF2863 Putative Rieske (2Fe-2S) family oxidoreductase, large subunit no 0.39
    17 GFF4583 Transcriptional regulator, AraC family no 0.39
    18 GFF4458 Histidine kinase no 0.39
    19 GFF176 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) no 0.39
    20 GFF4742 hypothetical protein no 0.38

    Or look for negative cofitness