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  • Top cofit genes for GFF4848 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

    Syd protein
    SEED: Syd protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1978 Nucleoside permease NupC 0.44 0.82
    2 GFF2457 Putative sensor-like histidine kinase YfhK 0.52 0.79
    3 GFF1985 tRNA-Ala-GGC no 0.78
    4 GFF1597 Glutamate--cysteine ligase (EC 6.3.2.2) 0.73 0.77
    5 GFF2992 Flavodoxin 2 no 0.75
    6 GFF1631 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) no 0.75
    7 GFF1983 tRNA-Arg-CCT no 0.75
    8 GFF2888 regulator of length of O-antigen component of lipopolysaccharide chains 0.20 0.75
    9 GFF2688 Peptide transport periplasmic protein SapA no 0.75
    10 GFF832 '3'-to-5' exoribonuclease RNase R' transl_table=11 0.68 0.74
    11 GFF2455 Putative sensory histidine kinase YfhA 0.51 0.74
    12 GFF1702 Transcriptional regulator, GntR family 0.66 0.74
    13 GFF2753 Hnr protein 0.58 0.73
    14 GFF2456 putative alpha helix protein 0.56 0.73
    15 GFF1500 tRNA pseudouridine synthase B (EC 4.2.1.70) 0.70 0.73
    16 GFF2193 FIG01200701: possible membrane protein no 0.73
    17 GFF2133 RNase E specificity factor CsrD 0.43 0.72
    18 GFF2648 tRNA(Cytosine32)-2-thiocytidine synthetase 0.54 0.72
    19 GFF1710 Kup system potassium uptake protein no 0.72
    20 GFF1046 Purine nucleoside phosphorylase (EC 2.4.2.1) 0.39 0.72

    Or look for negative cofitness