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  • Top cofit genes for GFF4847 from Variovorax sp. SCN45

    Conjugative transfer protein TrbD
    SEED: Conjugative transfer protein TrbD
    KEGG: type IV secretion system protein VirB3

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5127 no description no 0.62
    2 GFF5662 no description no 0.59
    3 GFF7368 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.59
    4 GFF6097 1,2-phenylacetyl-CoA epoxidase, subunit E (EC 1.14.13.149) no 0.58
    5 GFF317 Acyl carrier protein no 0.58
    6 GFF4903 no description no 0.57
    7 GFF7084 Mobile element protein no 0.57
    8 GFF1518 3-dehydroquinate dehydratase II (EC 4.2.1.10) no 0.56
    9 GFF1892 no description no 0.56
    10 GFF3094 17 kDa surface antigen no 0.55
    11 GFF4228 2-hydroxychromene-2-carboxylate isomerase no 0.55
    12 GFF6107 Zinc transporter, ZIP family no 0.55
    13 GFF4733 Nitric oxide -responding transcriptional regulator Dnr (Crp/Fnr family) no 0.55
    14 GFF7060 BUG/TctC family periplasmic protein no 0.55
    15 GFF3787 Biotin carboxylase (EC 6.3.4.14) no 0.54
    16 GFF3470 Permease of the drug/metabolite transporter (DMT) superfamily no 0.54
    17 GFF2968 MaoC-like dehydratase no 0.54
    18 GFF5589 Methionine aminopeptidase (EC 3.4.11.18) no 0.54
    19 GFF2397 Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily no 0.54
    20 GFF4212 Methionine gamma-lyase (EC 4.4.1.11) no 0.53

    Or look for negative cofitness