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  • Top cofit genes for GFF4843 from Variovorax sp. SCN45

    Conjugative transfer protein TrbF
    SEED: Conjugative transfer protein TrbF
    KEGG: type IV secretion system protein VirB5

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4672 Exoenzymes regulatory protein AepA precursor no 0.67
    2 GFF4828 no description no 0.66
    3 GFF3145 Two-component system response regulator QseB no 0.65
    4 GFF4972 Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) no 0.64
    5 GFF7266 L-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.16) no 0.63
    6 GFF674 no description no 0.61
    7 GFF1629 Ferric reductase (1.6.99.14) no 0.61
    8 GFF4072 hypothetical protein no 0.60
    9 GFF378 RNA (nucleoside 2'-O)-methyltransferase no 0.60
    10 GFF5782 BUG/TctC family periplasmic protein no 0.59
    11 GFF7139 MATE efflux family protein no 0.59
    12 GFF1764 hypothetical protein no 0.59
    13 GFF1632 RNA polymerase ECF-type sigma factor no 0.59
    14 GFF5600 no description no 0.57
    15 GFF6932 no description no 0.57
    16 GFF3451 no description no 0.56
    17 GFF3177 hypothetical protein no 0.55
    18 GFF1648 Ligand-binding SRPBCC domain protein family no 0.55
    19 GFF2424 ABC transporter, permease protein 1 (cluster 1, maltose/g3p/polyamine/iron) no 0.55
    20 GFF4460 Phosphatidate cytidylyltransferase (EC 2.7.7.41) no 0.55

    Or look for negative cofitness