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  • Top cofit genes for PS417_24765 from Pseudomonas simiae WCS417

    membrane protein
    SEED: LrgA-associated membrane protein LrgB

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_16570 isocitrate lyase 0.69 0.72
    2 PS417_21750 acetyl-CoA synthetase 0.89 0.65
    3 PS417_26040 malate synthase 0.61 0.63
    4 PS417_25920 pyrroloquinoline quinone biosynthesis protein PqqF no 0.61
    5 PS417_25940 pyrroloquinoline quinone biosynthesis protein PqqE 0.44 0.57
    6 PS417_17435 dehydrogenase no 0.56
    7 PS417_25930 pyrroloquinoline quinone biosynthesis protein PqqC no 0.55
    8 PS417_17485 membrane protein no 0.55
    9 PS417_17420 ethanol oxidation regulatory protein ercA (from data) no 0.53
    10 PS417_17480 branched-chain amino acid ABC transporter substrate-binding protein no 0.53
    11 PS417_19965 histidine kinase 0.67 0.53
    12 PS417_17495 multidrug ABC transporter permease 0.36 0.53
    13 PS417_17425 hypothetical protein no 0.52
    14 PS417_24100 transcriptional regulator PdhR 0.59 0.48
    15 PS417_17490 ABC transporter ATP-binding protein no 0.46
    16 PS417_17450 amino acid ABC transporter substrate-binding protein no 0.46
    17 PS417_17505 LuxR family transcriptional regulator no 0.45
    18 PS417_12290 sulfite reductase 0.45 0.45
    19 PS417_16465 sirohydrochlorin ferrochelatase 0.37 0.45
    20 PS417_17415 histidine kinase no 0.44

    Or look for negative cofitness