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    • Top cofit genes for GFF4842 from Variovorax sp. SCN45

    Conjugative transfer protein TrbG
    SEED: Conjugative transfer protein TrbG
    KEGG: type IV secretion system protein VirB9

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3552 Hsp90xo protein no 0.58
    2 GFF2457 no description no 0.53
    3 GFF6982 hypothetical protein no 0.52
    4 GFF3364 Rhodanese-related sulfurtransferase no 0.51
    5 GFF5455 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) no 0.51
    6 GFF1234 Peptide-methionine (S)-S-oxide reductase MsrA (EC 1.8.4.11) no 0.51
    7 GFF2922 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.50
    8 GFF4546 Permease of the drug/metabolite transporter (DMT) superfamily no 0.50
    9 GFF6768 hypothetical protein no 0.50
    10 GFF6227 hypothetical protein no 0.50
    11 GFF623 Demethylmenaquinone methyltransferase-like protein no 0.48
    12 GFF6788 Multicopper oxidase no 0.46
    13 GFF480 Glycine betaine/L-proline transport ATP-binding protein ProV (TC 3.A.1.12.1) no 0.46
    14 GFF5308 Epoxide hydrolase (EC 3.3.2.9) no 0.46
    15 GFF4802 Osmotically-inducible lipoprotein OsmB no 0.46
    16 GFF2992 BUG/TctC family periplasmic protein no 0.46
    17 GFF2074 hypothetical protein no 0.44
    18 GFF4209 no description no 0.44
    19 GFF1684 no description no 0.44
    20 GFF5426 Phosphoenolpyruvate synthase (EC 2.7.9.2) no 0.44

    Or look for negative cofitness