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  • Top cofit genes for GFF4841 from Variovorax sp. SCN45

    Conjugative transfer protein TrbI
    SEED: Conjugative transfer protein TrbI
    KEGG: type IV secretion system protein VirB10

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2317 FIG015287: Zinc protease no 0.60
    2 GFF3766 hypothetical protein no 0.53
    3 GFF4594 Aspartate ammonia-lyase (EC 4.3.1.1) no 0.52
    4 GFF5033 ABC-type spermidine/putrescine transport system, permease component II no 0.51
    5 GFF4403 Mobile element protein no 0.50
    6 GFF1491 Gluconolactonase no 0.49
    7 GFF6503 no description no 0.49
    8 GFF2156 Deoxyribodipyrimidine photolyase (EC 4.1.99.3) no 0.48
    9 GFF1132 3-oxoacyl-[acyl-carrier-protein] synthase III (EC 2.3.1.41) no 0.48
    10 GFF2170 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) no 0.47
    11 GFF5655 Formate dehydrogenase formation protein FdhE 0.39 0.47
    12 GFF761 FIG00537905: hypothetical protein no 0.47
    13 GFF3906 Acyl-CoA dehydrogenase no 0.47
    14 GFF3948 Acetyltransferase, GNAT family no 0.45
    15 GFF3982 Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1) no 0.45
    16 GFF328 hypothetical protein no 0.45
    17 GFF3704 FIG00536957: hypothetical protein no 0.44
    18 GFF6284 Cytochrome b561 no 0.44
    19 GFF5925 no description no 0.44
    20 GFF5501 Glyoxalase family protein no 0.44

    Or look for negative cofitness