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  • Top cofit genes for PS417_24750 from Pseudomonas simiae WCS417

    3-methyladenine DNA glycosylase
    SEED: DNA-3-methyladenine glycosylase II (EC 3.2.2.21)
    KEGG: DNA-3-methyladenine glycosylase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_23155 pilus assembly protein PilW no 0.33
    2 PS417_11900 conjugal transfer protein TraR no 0.33
    3 PS417_14075 hypothetical protein no 0.30
    4 PS417_26055 cyclic nucleotide-binding protein no 0.28
    5 PS417_26525 DEAD/DEAH box helicase no 0.27
    6 PS417_15265 type VI secretion protein VasK no 0.26
    7 PS417_17195 pyruvate dehydrogenase no 0.25
    8 PS417_15255 serine/threonine protein kinase no 0.25
    9 PS417_24805 Fis family transcriptional regulator no 0.24
    10 PS417_02435 flagellar motor protein MotA 0.49 0.24
    11 PS417_23080 sugar ABC transporter ATPase no 0.24
    12 PS417_27605 hypothetical protein no 0.24
    13 PS417_27875 histidine kinase no 0.24
    14 PS417_27610 hypothetical protein 0.37 0.24
    15 PS417_17295 RND transporter MFP subunit no 0.23
    16 PS417_11890 Inositol transport system ATP-binding protein (from data) no 0.23
    17 PS417_15260 protein phosphatase no 0.23
    18 PS417_22480 ferritin no 0.22
    19 PS417_22065 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (from data) 0.23 0.22
    20 PS417_19055 ArsR family transcriptional regulator no 0.22

    Or look for negative cofitness