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  • Top cofit genes for GFF4839 from Variovorax sp. SCN45

    Transcriptional regulator PA2737, MerR family
    SEED: Transcriptional regulator, MerR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6294 Cell division protein no 0.71
    2 GFF6036 DNA translocase FtsK 0.47 0.68
    3 GFF7373 CaiB/BaiF family protein no 0.64
    4 GFF7375 Arginine:pyruvate transaminase no 0.64
    5 GFF7371 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) no 0.63
    6 GFF7295 HPr kinase/phosphorylase no 0.61
    7 GFF255 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) no 0.61
    8 GFF6424 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) 0.54 0.60
    9 GFF4397 hypothetical protein no 0.60
    10 GFF6873 Aminotransferase, DegT/DnrJ/EryC1/StrS family no 0.59
    11 GFF3456 Possible regulatory protein similar to urea ABC transporter, substrate binding protein no 0.58
    12 GFF6049 Acyl-CoA dehydrogenase family protein no 0.58
    13 GFF239 DNA polymerase III chi subunit (EC 2.7.7.7) no 0.58
    14 GFF7146 Putative oxidoreductase in 4-hydroxyproline catabolic gene cluster no 0.57
    15 GFF6219 hypothetical protein no 0.57
    16 GFF2649 putative autotransporter protein no 0.57
    17 GFF7323 Transcriptional response regulatory protein GlrR no 0.57
    18 GFF3889 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) no 0.56
    19 GFF6876 Aminotransferase, DegT/DnrJ/EryC1/StrS family no 0.55
    20 GFF2504 Cell division protein ZapD 0.46 0.55

    Or look for negative cofitness