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    • Top cofit genes for GFF4839 from Sphingobium sp. HT1-2

    Threonine dehydrogenase and related Zn-dependent dehydrogenases
    SEED: Threonine dehydrogenase and related Zn-dependent dehydrogenases

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4072 ADP-ribose pyrophosphatase of COG1058 family (EC 3.6.1.13) no 0.79
    2 GFF1656 Proline dipeptidase no 0.75
    3 GFF5189 Lipoprotein signal peptidase (EC 3.4.23.36) no 0.73
    4 GFF2040 hypothetical protein no 0.71
    5 GFF1981 Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly no 0.70
    6 GFF4825 Toxin HigB / Protein kinase domain of HipA no 0.69
    7 GFF4778 Uncharacterized UPF0118 membrane protein no 0.69
    8 GFF466 D-alanine--D-alanine ligase (EC 6.3.2.4) no 0.69
    9 GFF538 Acetyl-CoA acetyltransferase (EC 2.3.1.9) @ 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) no 0.68
    10 GFF1774 hypothetical protein no 0.68
    11 GFF1631 hypothetical protein no 0.67
    12 GFF2361 hypothetical protein no 0.67
    13 GFF2620 hypothetical protein no 0.67
    14 GFF3490 L,D-transpeptidase no 0.66
    15 GFF162 putative secreted protein no 0.66
    16 GFF1203 Di-tripeptide/cation symporter no 0.66
    17 GFF3214 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.62 0.65
    18 GFF5151 RNA polymerase ECF-type sigma factor no 0.65
    19 GFF3637 hypothetical protein no 0.65
    20 GFF4854 Error-prone repair homolog of DNA polymerase III alpha subunit (EC 2.7.7.7) 0.44 0.64

    Or look for negative cofitness