Top cofit genes for GFF4830 from Variovorax sp. SCN45

Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
SEED: Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Rank Hit Name Description Conserved? Cofitness  
1 GFF3162 Sulfoacetaldehyde acetyltransferase (EC 2.3.3.15) no 0.65
2 GFF5390 RecA protein no 0.63
3 GFF3063 mandelate racemase/muconate lactonizing enzyme family protein no 0.59
4 GFF2567 Molybdopterin-synthase adenylyltransferase (EC 2.7.7.80) no 0.59
5 GFF2144 tRNA-dihydrouridine synthase DusB no 0.59
6 GFF6779 ATP-dependent RNA helicase RhlE (EC 3.6.4.13) no 0.58
7 GFF4821 Transcriptional regulator, AcrR family no 0.58
8 GFF1187 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) no 0.58
9 GFF6328 LPS-assembly lipoprotein LptE no 0.57
10 GFF735 no description no 0.57
11 GFF1392 Monooxygenase, flavin-binding family no 0.57
12 GFF553 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) no 0.56
13 GFF2000 Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) 0.36 0.56
14 GFF3200 hypothetical protein no 0.56
15 GFF1478 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) no 0.55
16 GFF5334 Phospholipid ABC transporter ATP-binding protein MlaF no 0.55
17 GFF4488 Metal-binding GTPase YjiA no 0.55
18 GFF108 General secretion pathway protein G no 0.54
19 GFF483 Fumarate hydratase class I, aerobic (EC 4.2.1.2) no 0.54
20 GFF2572 Protein-export protein SecB (maintains pre-export unfolded state) no 0.54

Or look for negative cofitness