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  • Top cofit genes for GFF4828 from Sphingobium sp. HT1-2

    IncQ plasmid conjugative transfer DNA nicking endonuclease TraR (pTi VirD2 homolog)
    SEED: IncQ plasmid conjugative transfer DNA nicking endonuclease TraR (pTi VirD2 homolog)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF674 Nuclease no 0.86
    2 GFF3437 Transcriptional regulator, AraC family no 0.81
    3 GFF3878 hypothetical protein no 0.80
    4 GFF3532 hypothetical protein no 0.80
    5 GFF253 DedA no 0.80
    6 GFF4968 pectin acetylesterase no 0.79
    7 GFF1763 Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) no 0.78
    8 GFF4670 hypothetical protein no 0.77
    9 GFF4748 Uncharacterized membrane-anchored protein no 0.76
    10 GFF4763 SAM-dependent methyltransferase no 0.75
    11 GFF4972 TonB-dependent receptor no 0.75
    12 GFF3169 Polymer-forming bactofilin no 0.75
    13 GFF41 hypothetical protein no 0.74
    14 GFF4090 hypothetical protein no 0.73
    15 GFF781 Uncharacterized protein SPO3846 no 0.73
    16 GFF882 Fumarylacetoacetase (EC 3.7.1.2) no 0.73
    17 GFF4088 hypothetical protein no 0.73
    18 GFF72 Arginine N-succinyltransferase (EC 2.3.1.109) no 0.73
    19 GFF133 Biotin synthase (EC 2.8.1.6) no 0.72
    20 GFF19 hypothetical protein no 0.72

    Or look for negative cofitness