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  • Top cofit genes for GFF4822 from Variovorax sp. SCN45

    Thiamine pyrophosphate-requiring enzymes
    SEED: Acetolactate synthase large subunit (EC 2.2.1.6)
    KEGG: acetolactate synthase I/II/III large subunit

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6613 no description no 0.63
    2 GFF1920 Cysteine dioxygenase (EC 1.13.11.20) no 0.60
    3 GFF4926 Probable carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23) no 0.60
    4 GFF6771 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58) no 0.58
    5 GFF2083 putative periplasmic membrane protein no 0.58
    6 GFF2829 Uncharacterized protein CC_3060 no 0.57
    7 GFF3562 UDP-glucose 6-dehydrogenase (EC 1.1.1.22) no 0.57
    8 GFF2427 Transcriptional regulator, MarR family no 0.56
    9 GFF2075 BUG/TctC family periplasmic protein no 0.55
    10 GFF1896 Two-component transcriptional response regulator, LuxR family no 0.54
    11 GFF4410 Transcriptional regulator, LysR family no 0.52
    12 GFF4871 FIG00457034: hypothetical protein no 0.52
    13 GFF4882 putative plasmid stabilization protein no 0.52
    14 GFF3574 hypothetical protein no 0.52
    15 GFF3578 Glutathione S-transferase, unnamed subgroup (EC 2.5.1.18) no 0.52
    16 GFF3733 no description no 0.52
    17 GFF2333 hypothetical protein no 0.50
    18 GFF4378 HYPOTHETICAL/UNKNOWN PROTEIN no 0.50
    19 GFF5467 Hydroxymethylpyrimidine ABC transporter, substrate-binding component no 0.50
    20 GFF5239 hypothetical protein no 0.50

    Or look for negative cofitness