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  • Top cofit genes for GFF4815 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

    CRISPR-associated helicase Cas3
    SEED: CRISPR-associated helicase Cas3

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF22 Methionine ABC transporter permease protein no 0.46
    2 GFF631 DamX, an inner membrane protein involved in bile resistance no 0.45
    3 GFF960 putative ATP-dependent protease no 0.44
    4 GFF2244 FIG074102: hypothetical protein no 0.44
    5 GFF509 Putative phosphosugar-binding protein no 0.43
    6 GFF4745 secretion chaparone no 0.43
    7 GFF170 SgrR, sugar-phosphate stress, transcriptional activator of SgrS small RNA no 0.42
    8 GFF648 Phosphoglycerate mutase (EC 5.4.2.1) no 0.42
    9 GFF3080 FIG074102: hypothetical protein no 0.41
    10 GFF768 Arginine ABC transporter, periplasmic arginine-binding protein ArtJ no 0.41
    11 GFF3407 SifA protein no 0.41
    12 GFF577 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) no 0.41
    13 GFF3461 hypothetical protein no 0.41
    14 GFF3885 Colanic acid biosynthesis protein wcaM no 0.41
    15 GFF3545 Transcriptional regulator, AraC family no 0.41
    16 GFF2242 D-tyrosyl-tRNA(Tyr) deacylase (EC 3.6.1.n1) no 0.40
    17 GFF2850 Ribosomal RNA small subunit methyltransferase F (EC 2.1.1.-) no 0.40
    18 GFF4001 FIG00638997: hypothetical protein no 0.40
    19 GFF4810 CRISPR-associated protein, Cse3 family no 0.40
    20 GFF4852 Serine transporter no 0.39

    Or look for negative cofitness