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  • Top cofit genes for GFF4814 from Variovorax sp. SCN45

    Conserved hypothetical protein potentially related to ribose or hydroxymethylpyrimidine metabolism
    SEED: Conserved hypothetical protein potentially related to ribose or hydroxymethylpyrimidine metabolism

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7266 L-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.16) no 0.64
    2 GFF3219 hypothetical protein no 0.58
    3 GFF3075 Surface antigen no 0.56
    4 GFF313 FIG027190: Putative transmembrane protein no 0.55
    5 GFF156 Glycosyl transferase, group 2 family no 0.55
    6 GFF3854 FIG01269488: protein, clustered with ribosomal protein L32p no 0.55
    7 GFF6383 FIG00440100: hypothetical protein no 0.54
    8 GFF2772 Site-specific tyrosine recombinase XerD no 0.54
    9 GFF1841 Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4) no 0.54
    10 GFF4576 BUG/TctC family periplasmic protein no 0.53
    11 GFF1340 ABC transporter, ATP-binding protein 1 RSc1753 no 0.53
    12 GFF5022 FIG011065: hypothetical protein no 0.53
    13 GFF4291 Putative oxidoreductase YncB no 0.53
    14 GFF5407 Membrane protein TerC, possibly involved in tellurium resistance no 0.53
    15 GFF6297 Putative transmembrane protein no 0.52
    16 GFF5742 Flagellar motor switch protein FliN no 0.52
    17 GFF5365 Outer membrane stress sensor protease DegS no 0.51
    18 GFF6195 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.51
    19 GFF1332 no description no 0.51
    20 GFF653 no description no 0.49

    Or look for negative cofitness