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  • Top cofit genes for PS417_24580 from Pseudomonas simiae WCS417

    pseudouridine synthase
    SEED: Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70)
    KEGG: ribosomal large subunit pseudouridine synthase E

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_11065 S-transferase 0.13 0.25
    2 PS417_20040 cobyric acid synthase 0.53 0.24
    3 PS417_27910 PppA no 0.23
    4 PS417_14920 CoA-transferase 0.30 0.22
    5 PS417_20035 adenosylcobinamide kinase 0.26 0.22
    6 PS417_02890 cobalt-precorrin-6X reductase 0.25 0.21
    7 PS417_09415 3-isopropylmalate dehydratase no 0.21
    8 PS417_15310 type VI secretion protein no 0.21
    9 PS417_24335 50S rRNA methyltransferase 0.63 0.21
    10 PS417_26370 RNA helicase 0.53 0.21
    11 PS417_22320 amino acid APC transporter no 0.21
    12 PS417_24500 DEAD/DEAH box helicase 0.42 0.20
    13 PS417_02560 23S rRNA methyltransferase 0.48 0.20
    14 PS417_23935 SAM-dependent methyltransferase no 0.20
    15 PS417_12325 precorrin-4 C11-methyltransferase no 0.20
    16 PS417_08530 spermidine synthase no 0.20
    17 PS417_26510 5,10-methylenetetrahydrofolate reductase 0.42 0.19
    18 PS417_04435 uracil phosphoribosyltransferase 0.34 0.19
    19 PS417_15820 universal stress protein UspA no 0.19
    20 PS417_28170 transcriptional regulator 0.28 0.19

    Or look for negative cofitness