Top cofit genes for GFF4804 from Variovorax sp. SCN45

tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
SEED: TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA
KEGG: UPF0079 ATP-binding protein

Rank Hit Name Description Conserved? Cofitness  
1 GFF7334 Nucleoside-diphosphate-sugar epimerases no 0.70
2 GFF5454 Transcriptional regulator, AsnC family no 0.65
3 GFF4058 Copper/silver efflux RND transporter, outer membrane protein CusC no 0.62
4 GFF1516 TRAP-type C4-dicarboxylate transport system, large permease component no 0.60
5 GFF1343 macromolecule metabolism; macromolecule degradation; degradation of proteins, peptides, glycopeptides no 0.60
6 GFF4716 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) no 0.59
7 GFF4930 Transcriptional regulator, LysR family no 0.58
8 GFF3689 FIG01198523: hypothetical protein no 0.56
9 GFF3432 L-carnitine dehydratase/bile acid-inducible protein F no 0.56
10 GFF5147 Alpha-ketoglutarate-dependent taurine dioxygenase (EC 1.14.11.17) no 0.55
11 GFF1592 Response regulator/GGDEF/EAL domain protein no 0.55
12 GFF895 Putative transcriptional regulatory protein no 0.55
13 GFF5601 Predicted hydrolase of the alpha/beta-hydrolase fold no 0.54
14 GFF1759 PQQ-dependent oxidoreductase, gdhB family no 0.53
15 GFF801 Murein hydrolase activator NlpD no 0.53
16 GFF3166 Transcriptional regulator, IclR family no 0.53
17 GFF5652 FIG00014764: hypothetical protein no 0.52
18 GFF5747 Flagellum-specific ATP synthase FliI no 0.52
19 GFF4890 hypothetical protein no 0.52
20 GFF900 hypothetical protein no 0.52

Or look for negative cofitness